The highest paying cities for Healthcare Data Analysts include Chicago, Illinois, and Boston, Massachusetts. In Chicago, professionals can expect an average salary of $96,864, while in Boston, the average salary reaches $89,302. These cities offer strong demand and competitive wages for skilled Healthcare Data Analysts. In Portland, Oregon, and Atlanta, Georgia, the average salaries for this role are also quite attractive, at $88,134 and $80,942 respectively. Job seekers in these cities find opportunities with good compensation packages. Other cities such as Albany, New York, and Tallahassee, Florida, provide reasonable salaries, making them viable options for those looking to enter this field.